Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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bam to trimmed fastqs and biscuit alignments
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![]() Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd |
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umi duplex alignment workflow
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![]() Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd |
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kmer_top_n_extract
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![]() Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 8a8fffb78b1e327ba0da51840ac8acc0c218d611 |
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xenbase-sra-to-fastq-se.cwl
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![]() Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 915ea871cc28f7b666a4d7b476fdaa7b454ce7c3 |
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Filter Protein Alignments
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![]() Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31 |
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Detect Variants workflow
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![]() Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05 |
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cache_asnb_entries
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![]() Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 77a9fa25b89ce73582a1ce6ba75fa6d2537fb8e8 |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
![]() Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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Filter Protein Seeds; Find ProSplign Alignments
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![]() Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31 |
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scatter-valuefrom-wf5.cwl
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![]() Path: tests/scatter-valuefrom-wf5.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3 |