Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/baminou/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: 0fa87c018a21d55cdea6e89be1feec1913144009 |
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preference-workflow.cwl
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https://github.com/duke-gcb/imads-worker.git
Path: predict_service/preference-workflow.cwl Branch/Commit ID: f6faaa5108cf468b0deec0f391abbd4d98721d84 |
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readgroups_bam_to_readgroups_fastq_lists.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/baminou/OxoG-Dockstore-Tools.git
Path: preprocess_vcf.cwl Branch/Commit ID: a7d65918c444ee3c99c56bd0f08c2ce670a853ed |
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5S-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: 823cdf7a6601a3799f6167f3566ae02590748f6b |
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dynresreq-workflow.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow.cwl Branch/Commit ID: 4fe434e969c93c94b690ba72db295d9d52a6f576 |
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spiel.cwl
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https://github.com/mr-c/spiel.git
Path: spiel.cwl Branch/Commit ID: 22d5f98c20156859741052fd1989ebafb142bb1b |
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1st-workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl Branch/Commit ID: 1eb6bfe3c77aebaf69453a669d21ae7a5a78056f |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/baminou/OxoG-Dockstore-Tools.git
Path: minibam_sub_wf.cwl Branch/Commit ID: c162a19d83f872fe0dc0077e18bef22c99423e4d |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: 88c5eef2f5ee5c1e878b0476f6e1f74cecf9ec29 |