Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow.cwl

https://github.com/Andreja28/cloud-workflows.git

Path: cwl/pak-fs/workflow.cwl

Branch/Commit ID: ed5dd0589aa951193f4b98f44b0edc7f58e04ba5
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph checkm

https://github.com/ncbi/pgap.git

Path: checkm/wf_checkm.cwl

Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
workflow graph Water body detection based on NDWI and otsu threshold

Water body detection based on NDWI and otsu threshold

 https://github.com/Terradue/ogc-eo-application-package-hands-on.git

Path: water-bodies/app-package.cwl

Branch/Commit ID: 08b5aee8764269bf92c41b0fd67f42683196b41e

Packed ID: detect_water_body
workflow graph Detect Variants workflow for WGS pipeline

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants_wgs.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph workflow_single.cwl

https://github.com/emrecdem/erd-etl.git

Path: workflow_single.cwl

Branch/Commit ID: 14e02270a1079c349c49236d6428926847a5823d
workflow graph umi duplex alignment workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985
workflow graph Detect Variants workflow for WGS pipeline

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/detect_variants_wgs.cwl

Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985
workflow graph EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-qc-paired.cwl

Branch/Commit ID: 7bb76f33bf40b5cd2604001cac46f967a209c47f
workflow graph wgs alignment with qc

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/alignment_wgs.cwl

Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985