Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	STAR-RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq_star_fusion.cwl Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
	Run genomic CMsearch	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9
	output-arrays-int-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/output-arrays-int-wf.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
	bam2fasta.cwl	https://github.com/arvados/bh20-seq-resource.git Path: workflows/fastq2fasta/bam2fasta.cwl Branch/Commit ID: 2ae71911cd87ce4f2eabdff21e538267b3270d45
	workflow-blast-ebeye-pdbe.cwl	https://github.com/ebi-wp/webservice-cwl.git Path: workflows/workflow-blast-ebeye-pdbe.cwl Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d
	Functional analyis of sequences that match the 16S SSU	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: f6b5196bd493b0872ee6e63aa3499738bb7d53d6
	animal-genome-assembly.packed.cwl#hybrid_error_correction.cwl Sub workflow used in the Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak), CWLized by Tazro Ohta (@inutano)	https://github.com/pitagora-network/DAT2-cwl.git Path: workflow/animal-genome-assembly/animal-genome-assembly.packed.cwl Branch/Commit ID: 6db4456ca7314b036e59f50910654066da99772a Packed ID: hybrid_error_correction.cwl
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
	trim-rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe-dutp.cwl Branch/Commit ID: 687116aeadebda243e8616e0eda2df4c9466c0bf
	nestedworkflows.cwl	https://github.com/common-workflow-language/user_guide.git Path: src/_includes/cwl/workflows/nestedworkflows.cwl Branch/Commit ID: 7f19ad8da5dba35b496c67dab3875e7a75193dc9