Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Data2Services CWL workflow to convert CSV/TSV files with statements split, Vincent Emonet <vincent.emonet@gmail.com>

https://github.com/maastrichtu-ids/bio2rdf.git

Path: support/aynec-fb13-a/virtuoso-workflow/workflow.cwl

Branch/Commit ID: master
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: develop
workflow graph module-3.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/module-3.cwl

Branch/Commit ID: master
workflow graph gcaccess_from_list

https://github.com/ncbi/pgap.git

Path: task_types/tt_gcaccess_from_list.cwl

Branch/Commit ID: master
workflow graph chksum_seqval_wf_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_interleaved_fq.cwl

Branch/Commit ID: 0.3.2
workflow graph foldseek easy-search workflow (Stringent Mode)

\"foldseek easy-search sub-workflow for plant2human workflow (Stringent Mode) Uses self-built Foldseek index (e.g., Human Proteome v6) without taxonomy filtering. Step 1: listing protein structure files (mmCIF format) Step 2: foldseek easy-search process\"

https://github.com/yonesora56/plant2human.git

Path: Workflow/10_foldseek_easy_search_swf_stringent.cwl

Branch/Commit ID: main
workflow graph wf.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/multisource/wf.cwl

Branch/Commit ID: main
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 56dafa4
workflow graph FASTQ Vector Removal

This workflow clean up vectros from fastq files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-vector-removal.cwl

Branch/Commit ID: master
workflow graph Varscan Workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: low-vaf