Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: c502823
workflow graph uparseRenameWithMetadata.cwl

https://github.com/h3abionet/h3abionet16S.git

Path: workflows-cwl/uparseRenameWithMetadata.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: d4e5e53
workflow graph ST520105.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520105.cwl

Branch/Commit ID: main
workflow graph 03-map-se.cwl

ATAC-seq 03 mapping - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl

Branch/Commit ID: v1.0.0
workflow graph 03-map-pe.cwl

ATAC-seq 03 mapping - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: master
workflow graph QIIME2 Step 3

QIIME2 Alpha/beta diversity analysis and Alpha rarefaction plotting

https://github.com/bespin-workflows/16s-qiime2.git

Path: 16s-step3-alpha-beta-analysis.cwl

Branch/Commit ID: develop
workflow graph Transcriptome assembly workflow (single-end version)

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/TranscriptomeAssembly-wf.single-end.cwl

Branch/Commit ID: master
workflow graph wrf_workflow.cwl

https://github.com/UoMResearchIT/wrf_emep_cwl_linear_workflow.git

Path: workflows/wrf_workflow.cwl

Branch/Commit ID: develop
workflow graph runner.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/runner.cwl

Branch/Commit ID: 1.1