Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph IMG/VR blast

Run blast against IMG/VR

 https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/Tools/IMGvrBlast/imgvr_blast_swf.cwl

Branch/Commit ID: aad5474411ea31449b3e8a26eeed8920dd07fa17
workflow graph rest_parallel.cwl

https://github.com/CWL-FLOps/DecentralizedFL-CWL.git

Path: CWL_Workflow/rest_parallel.cwl

Branch/Commit ID: 1112d9522df51bbe40d1846d68d4bc4125de7445
workflow graph trnascan_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
workflow graph Run genomic CMsearch

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_gcmsearch.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
workflow graph DeriveArrayElementCoordinates

Derive array element coordinates and archive data generated in derivation process.

 https://github.com/gammasim/workflows.git

Path: workflows/DeriveArrayElementCoordinates.cwl

Branch/Commit ID: cc9902d92de18a6b2bf83dfbc50201cf1b7477b4
workflow graph module-3.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/module-3.cwl

Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf
workflow graph trim-rnaseq-pe.cwl

Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.

https://github.com/datirium/workflows.git

Path: workflows/trim-rnaseq-pe.cwl

Branch/Commit ID: 2d00e7f29c72d33b70dcd46b58db1fc31a7f2d86
workflow graph AcceptAndArchive

Accept and archive simulation model parameter(s). Acceptances includes review of validation process.

 https://github.com/gammasim/workflows.git

Path: workflows/AcceptParameter.cwl

Branch/Commit ID: cc9902d92de18a6b2bf83dfbc50201cf1b7477b4
workflow graph allele-rnaseq-pe.cwl

Allele specific RNA-Seq paired-end workflow

https://github.com/datirium/workflows.git

Path: workflows/allele-rnaseq-pe.cwl

Branch/Commit ID: 2d00e7f29c72d33b70dcd46b58db1fc31a7f2d86
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: 9c0b1497c467393e1a54735575043dced73e95c4