Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	STAR-Alignment-PE-circRNA This workflow aligns the fastq files using STAR for paired-end samples to be used in circRNA pipeline	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/star-alignment-circRNA.cwl Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
	assm_assm_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_assm_assm_blastn_wnode.cwl Branch/Commit ID: 91181df8d9ef8eed9d8f40db707b9a4376fecaf5
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 91181df8d9ef8eed9d8f40db707b9a4376fecaf5
	allele-process-strain.cwl	https://github.com/datirium/workflows.git Path: subworkflows/allele-process-strain.cwl Branch/Commit ID: 01c6af7a598eb44f6bcaa9b5eecf13229f28546e
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: 556884e8e205295e561b1d9140d836cdd6c1d8c9
	germline-gpu.cwl	https://github.com/mr-c/WGSpipeline.git Path: Workflows/germline-gpu.cwl Branch/Commit ID: c47b05b265d27219a543dd8163eb87cb14938551
	macro-cwl Main stage manager	https://github.com/fabricebrito/fgb.git Path: wrapped.cwl Branch/Commit ID: 08b3e734aadaca3454f3b1225ad3ab76bc10e56a Packed ID: main
	echo-wc_inline.cwl Counts words of a message via echo and wc	https://github.com/NLeSC/scriptcwl.git Path: tests/data/workflows/echo-wc_inline.cwl Branch/Commit ID: d2dcfa0686eaa893dd4b3efbd232e9bd1e15194d
	Detect Variants workflow for WGS pipeline	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_wgs.cwl Branch/Commit ID: 9cbf2a483e1b9e4cdb8e2564be27a9e64fc1169e
	protein annotation Proteins - predict, cluster, identify, annotate	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-annotation.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6