Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph extract_file_with_index.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/extract_file_with_index.cwl

Branch/Commit ID: 9aedc3fb22a3f5b9146bc5e9a393085050f90c95
workflow graph workflow-phmmer-blast.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-phmmer-blast.cwl

Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d
workflow graph wgs alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_wgs.cwl

Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
workflow graph spurious_annot

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass1.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines14-wf.cwl

Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
workflow graph mutect2_calling.cwl

GATK4.1.2 Mutect2 workflow

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: subworkflows/mutect2_calling.cwl

Branch/Commit ID: 138d484362084dfc97d9fb7d839855b4bc2c5599
workflow graph bulk-atac-seq-pipeline.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: bulk-atac-seq-pipeline.cwl

Branch/Commit ID: fab00c3064b4841ac587d9a4698b6f56fa6f3fca
workflow graph kmer_seq_entry_extract_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl

Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
workflow graph ValidateParameterByDataComparision

Validation by comparing simulation parameter with calibration or laboratory data values. Might include statistical evaluation of differences, plotting, or expert review.

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateParameterByDataComparision.cwl

Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
workflow graph workflow_ffn.cwl

local

 https://github.com/aplbrain/saber.git

Path: saber/i2g/examples/I2G_FFN/workflow_ffn.cwl

Branch/Commit ID: 051b9506fd7356113be013ac3c435a101fd95123