Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph upload_and_emit.cwl

https://github.com/NCI-GDC/vep-cwl.git

Path: v102/workflows/subworkflows/upload_and_emit.cwl

Branch/Commit ID: e553a62ddb1f8e9feb0f3d4ee2bb02ffeef6ce02
workflow graph count-lines13-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl

Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c
workflow graph Unaligned bam to sorted, markduped bam

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align_sort_markdup.cwl

Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5
workflow graph search.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/search.cwl

Branch/Commit ID: 526f36f93655bfb098f766ff020708b5a707513a

Packed ID: main
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-wf4.cwl

Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e

Packed ID: main
workflow graph pipeline.cwl#openoil_pipeline

Animation of an oil spill with openoil

 https://github.com/ILIAD-ocean-twin/application_package.git

Path: openoil/pipeline.cwl

Branch/Commit ID: cb62ab53f349bf64e880199d1e148439ebe456c1

Packed ID: openoil_pipeline
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/revsort.cwl

Branch/Commit ID: 6e9f82a6d2195d4f16f28fd6e1485138372fb430
workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf4.cwl

Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c

Packed ID: main
workflow graph Cell Ranger Aggregate (RNA+ATAC)

Cell Ranger Aggregate (RNA+ATAC) Combines outputs from multiple runs of “Cell Ranger Count (RNA+ATAC)” pipeline. The results of this workflow are primarily used in “Single-Cell Multiome ATAC and RNA-Seq Filtering Analysis” pipeline.

 https://github.com/datirium/workflows.git

Path: workflows/cellranger-arc-aggr.cwl

Branch/Commit ID: 261c0232a7a40880f2480b811ed2d7e89c463869
workflow graph Cell Ranger ARC Count Gene Expression + ATAC

Cell Ranger ARC Count Gene Expression + ATAC ============================================

 https://github.com/datirium/workflows.git

Path: workflows/cellranger-arc-count.cwl

Branch/Commit ID: 2caa50434966ebdf4b33e5ca689c2e4df32f9058