Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: a2cbea66cc3d27b70a56b8bcaf29fb7e1966a7a5
	trim-rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: a8909e86f5bcb048d136f9a7d70b4b6f8f4e485f
	Salmon quantification, FASTQ -> H5AD count matrix	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: steps/salmon-quantification.cwl Branch/Commit ID: a2cbea66cc3d27b70a56b8bcaf29fb7e1966a7a5
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: 526f36f93655bfb098f766ff020708b5a707513a
	conditional_step_no_inputs.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/conditional_step_no_inputs.cwl Branch/Commit ID: 55ccde7c2fe3e7899136ce8606a341e292d7050a
	default-wf5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-wf5.cwl Branch/Commit ID: 55ccde7c2fe3e7899136ce8606a341e292d7050a
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: d2c2f2eb846ae2e9cdcab46e3bb88e42126cb3f5
	step-valuefrom2-wf_v1_0.cwl	https://github.com/common-workflow-language/cwl-utils.git Path: testdata/step-valuefrom2-wf_v1_0.cwl Branch/Commit ID: 77669d4dd1d1ebd2bdd9810f911608146d9b8e51
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: e1a9100dff381ebd59b2a74806f705b7c68a8584