Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 2353ee2550529ca5b0705c94b32022a21713db18 |
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process VCF workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05 |
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mpi_simple_wf.cwl
Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mpi_simple_wf.cwl Branch/Commit ID: 84939620c3eec1ab11369849c63237ebfa48da41 |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb |
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: f7894707dd30a0edd199d3b67c4c8678f64c90b3 |
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: f7894707dd30a0edd199d3b67c4c8678f64c90b3 |
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process VCF workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 295e7b7f51727c0f2d6cc86ce817449b2e8dba3c |
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env-wf3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl Branch/Commit ID: 7bfd77118cdc80dd7150115dd7a1a7ee6046f6fe |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 5282690e0f634a5f83107ba878fe62cbbb347408 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 505b91e41741ccbcd5ebd2b6a09a3be604f9ece3 |
