Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Identifies non-coding RNAs using Rfams covariance models
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https://github.com/stain/workflow-is-cwl.git
Path: workflows/cmsearch-multimodel-wf.cwl Branch/Commit ID: avoid-spaces |
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workflow_simple.cwl
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https://github.com/fstrozzi/scalability-reproducibility-chapter.git
Path: CWL/workflow_simple.cwl Branch/Commit ID: master |
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retrieve metadata from Zenodo community
For a given Zenodo community, retrieve its repository records as Zenodo JSON and (eventually) schema.org JSON-LD and DataCite v4 XML. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zenodo-records.cwl Branch/Commit ID: master |
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oxog_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/oxog-dockstore-tools.git
Path: oxog_sub_wf.cwl Branch/Commit ID: master |
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main-NA12878-platinum-chr20.cwl
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https://github.com/BD2KGenomics/toil-workflows.git
Path: NA12878-platinum-chr20-workflow/main-NA12878-platinum-chr20.cwl Branch/Commit ID: master |
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02-trim-se.cwl
RNA-seq 02 trimming - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/02-trim-se.cwl Branch/Commit ID: master |
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scatter-wf2.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-wf2.cwl Branch/Commit ID: main |
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targeted alignment and low vaf variant detection
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/targeted_low_vaf_pipeline.cwl Branch/Commit ID: low-vaf |
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functional_annotation.cwl
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https://github.com/EBI-Metagenomics/pipeline-v5.git
Path: workflows/subworkflows/assembly/functional_annotation.cwl Branch/Commit ID: master |
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echo.scattered.cwl
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https://github.com/NLeSC/scriptcwl.git
Path: tests/data/echo.scattered.cwl Branch/Commit ID: master |
