Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bacterial_orthology_cond

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph io-int-default-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-int-default-wf.cwl

Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
workflow graph calibrator_sun.cwl

https://github.com/peijin94/LOFAR-Sun-tools.git

Path: utils/IM/LINC/lincSun/workflow/calibrator_sun.cwl

Branch/Commit ID: beb453843d8b30a7b220dfda85f5bcbafeff4e7e
workflow graph Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass2.cwl

Branch/Commit ID: 5b498b4c4f17bb8f17e6886aa4c5661d7aba34fc
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph gdc_dnaseq.bamfastq_align.workflow.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: gdc-dnaseq-aln-cwl/gdc_dnaseq.bamfastq_align.workflow.cwl

Branch/Commit ID: e0f19eb6da82b643ce891f81a8a127dee48ba97a
workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
workflow graph Cut-n-Run pipeline paired-end

Experimental pipeline for Cut-n-Run analysis. Uses mapping results from the following experiment types: - `chipseq-pe.cwl` - `trim-chipseq-pe.cwl` - `trim-atacseq-pe.cwl` Note, the upstream analyses should not have duplicates removed

https://github.com/datirium/workflows.git

Path: workflows/trim-chipseq-pe-cut-n-run.cwl

Branch/Commit ID: dda6e8b5ada3f106a2b3bfcc1b151eccf9977726
workflow graph bwameth_mulitlib_start_with_trimmed.cwl

https://github.com/ifishlin/Benchmarking_CWL.git

Path: workflows/bwameth/bwameth_mulitlib_start_with_trimmed.cwl

Branch/Commit ID: 1416ade270d1b990087e39c6680464c12cf564cc
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad