Explore Workflows

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/fail-unconnected.cwl

Branch/Commit ID: main

This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment

https://github.com/YeoLab/eclip.git

Path: cwl/wf_trim_and_map_chimeric_se.cwl

Branch/Commit ID: master

https://doi.org/10.1007/s12275-011-1213-z

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: d4e5e53

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 0746e12

## Activity by Contact Model of Enhancer-Gene Specificity in Common Workflow Language [broadinstitute/ABC-Enhancer-Gene-Prediction: Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)](https://github.com/broadinstitute/ABC-Enhancer-Gene-Prediction)

https://github.com/davidroberson/workflow-notebooks.git

Path: abc_enhancer_gene_prediction/abc-enchancer-gene-prediction-wf.cwl

Branch/Commit ID: main

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA24385-sv/NA24385-sv-workflow/wf-svcall.cwl

Branch/Commit ID: master

https://doi.org/10.1007/s12275-011-1213-z

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 5dc7c5c

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520117.cwl

Branch/Commit ID: main

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/paleocar_models/wf_calculate_Models.cwl

Branch/Commit ID: master

updated description testing 1.9.2

https://github.com/NatalieEO/ghapps-single-workflow.git

Path: Dockstore.cwl

Branch/Commit ID: master