Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph chksum_seqval_wf_paired_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_seqval_wf_paired_fq.cwl

Branch/Commit ID: 0.3.0
workflow graph functional analysis prediction with InterProScan

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/functional_analysis.cwl

Branch/Commit ID: master
workflow graph process VCF workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: strelka/process_vcf.cwl

Branch/Commit ID: master
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/azimuth-annotate.git

Path: pipeline.cwl

Branch/Commit ID: 2e4017d
workflow graph wf_fastqc.cwl

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/yeolab/eclip.git

Path: cwl/wf_fastqc.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 3168316
workflow graph rnaediting2strands.workflow.cwl

https://github.com/YeoLab/sailor.git

Path: CWL-SINGULARITY-pipeline-building-code/cwl/rnaediting2strands.workflow.cwl

Branch/Commit ID: 6f21086
workflow graph kegg_analysis.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/assembly/kegg_analysis.cwl

Branch/Commit ID: eosc-life-gos
workflow graph Gathered Downsample and HaplotypeCaller

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/gathered_downsample_and_recall.cwl

Branch/Commit ID: low-vaf
workflow graph hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl

Branch/Commit ID: master