Explore Workflows
View already parsed workflows here or click here to add your own
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Chipseq alignment for nonhuman with qc and creating homer tag directory
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Path: definitions/pipelines/chipseq_alignment_nonhuman.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
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Whole genome alignment and somatic variant detection
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Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
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exome alignment and germline variant detection
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Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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strelka workflow
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Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 4a04ad33e311c5e647cef848b74034477cb3c47e |
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wgs alignment and germline variant detection
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Path: definitions/pipelines/germline_wgs_gvcf.cwl Branch/Commit ID: b9e7392e72506cadd898a6ac4db330baf6535ab6 |
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exome alignment and somatic variant detection
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Path: definitions/pipelines/somatic_exome_nonhuman.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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count-lines9-wf.cwl
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Path: tests/count-lines9-wf.cwl Branch/Commit ID: 707ebcd2173889604459c5f4ffb55173c508abb3 |
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count-lines8-wf.cwl
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Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883 |
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ST520102.cwl
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Path: wf5201/ST520102.cwl Branch/Commit ID: 0e6cfe0646173e228b2fce63e23ed8f9d78598b0 |
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Nested workflow example
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Path: tests/wf/nested.cwl Branch/Commit ID: e9c83739a93fa0b18f8dea2f98b632a9e32725c9 |
