Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph qiime2 create feature visual summaries

FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/bespin-workflows/16s-qiime2.git

Path: subworkflows/qiime2-04-features.cwl

Branch/Commit ID: develop
workflow graph md5sum.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/md5sum.cwl

Branch/Commit ID: 77669d4dd1d1ebd2bdd9810f911608146d9b8e51
workflow graph qiime2 demux sequences

Demultiplexing sequences from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step1-import-demux.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: qiime2-02-demux.cwl
workflow graph blastp_wnode_naming

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastp_wnode_naming.cwl

Branch/Commit ID: test
workflow graph tt_kmer_compare_wnode

Pairwise comparison

 https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_compare_wnode.cwl

Branch/Commit ID: master
workflow graph hisat2_htseq_dexseq.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_htseq_dexseq.cwl

Branch/Commit ID: master
workflow graph foldseek easy-search sub-workflow

retrieve sequence from blastdbcmd result makeblastdb: ../Tools/14_makeblastdb.cwl blastdbcmd: ../Tools/15_blastdbcmd.cwl seqretsplit: ../Tools/16_seqretsplit.cwl needle (Global alignment): ../Tools/17_needle.cwl water (Local alignment): ../Tools/17_water.cwl

https://github.com/yonesora56/plant2human.git

Path: Workflow/11_retrieve_sequence_wf.cwl

Branch/Commit ID: 4fc824b36b986af931cc136be7a91355b772b39b
workflow graph BLAST against rRNA db

https://github.com/slottad/pgap.git

Path: bacterial_noncoding/wf_blastn.cwl

Branch/Commit ID: master
workflow graph Bacterial Annotation (two-pass)

https://github.com/slottad/pgap.git

Path: bacterial_annot/wf_bacterial_annot.cwl

Branch/Commit ID: master
workflow graph plant2human workflow

\"Novel gene discovery workflow by comparing plant species and human based on structural similarity search.\"

https://github.com/yonesora56/plant2human.git

Path: Workflow/plant2human.cwl

Branch/Commit ID: 4fc824b36b986af931cc136be7a91355b772b39b