Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: da35c7b700912dd3643e3dd2c5c96b7be3a4edad |
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module-4.cwl
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https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/module-4.cwl Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf |
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gather AML trio outputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle_gathered.cwl Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c |
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count-lines3-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: 1e3f5404b7d5af02e3dec0faea31352111ad7cd8 |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: c062f531bc8373f24ed3271543d4e4e9a13c30dd |
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rnaseq-pe-dutp.cwl
RNA-Seq basic analysis workflow for strand specific paired-end experiment. |
https://github.com/datirium/workflows.git
Path: workflows/rnaseq-pe-dutp.cwl Branch/Commit ID: 94471ee6c01b7bc17102e45e56e7366c2a52acdf |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fastq.workflow.cwl Branch/Commit ID: 963ca6a73a9f8879d57c08fa59548f98f28e755a |
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EMG pipeline v3.0 (paired end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v3-paired.cwl Branch/Commit ID: c1f8b22dc4da88c998cb00f4b2bebdff8c3632d7 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a |
