Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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scatter-wf3.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: 6e9f82a6d2195d4f16f28fd6e1485138372fb430 Packed ID: main |
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tt_kmer_top_n.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64 |
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ani_top_n
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https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 9144d08fa7f4e852498761481dceab477167fa65 |
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Build STAR indices
Workflow runs [STAR](https://github.com/alexdobin/STAR) v2.5.3a (03/17/2017) PMID: [23104886](https://www.ncbi.nlm.nih.gov/pubmed/23104886) to build indices for reference genome provided in a single FASTA file as fasta_file input and GTF annotation file from annotation_gtf_file input. Generated indices are saved in a folder with the name that corresponds to the input genome. |
https://github.com/datirium/workflows.git
Path: workflows/star-index.cwl Branch/Commit ID: e99e80a2c19682d59947bde04a892d7b6d90091c |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 1441c285e8a5afe399f5d52ca9059cb8bb513edb |
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any-type-compat.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/any-type-compat.cwl Branch/Commit ID: a0f2d38e37ff51721fdeaf993bb2ab474b17246b |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 9144d08fa7f4e852498761481dceab477167fa65 |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 9144d08fa7f4e852498761481dceab477167fa65 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: ae57b60e9b01e3f0f02f4e828042748409dff5a3 |
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sum-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/sum-wf.cwl Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df |
