Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 5833078 |
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protein_evidence_mapping.cwl
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https://github.com/pvanheus/lukasa.git
Path: protein_evidence_mapping.cwl Branch/Commit ID: main |
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Perform SV calling of sample vs matched control using Delly, Lumpy, and Manta
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/sv_caller.cwl Branch/Commit ID: master |
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if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl Branch/Commit ID: 0.4.0 |
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count-lines15-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines15-wf.cwl Branch/Commit ID: main |
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count-lines10-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines10-wf.cwl Branch/Commit ID: main |
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per_cluster_workflow.cwl
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https://github.com/fstrozzi/scalability-reproducibility-chapter.git
Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: master |
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igv-report_maf_workflow.cwl
Workflow to run GetBaseCountsMultiSample fillout on a number of samples, each with their own bam and maf files |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/igv-report_maf_workflow.cwl Branch/Commit ID: master |
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wf_clipseqcore_se_1barcode.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_se_1barcode.cwl Branch/Commit ID: master |
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wf_trim_partial_and_map_se.cwl
This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment |
https://github.com/yeolab/eclip.git
Path: cwl/wf_trim_partial_and_map_se.cwl Branch/Commit ID: master |
