Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Vcf concordance evaluation workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/vcf_eval_concordance.cwl

Branch/Commit ID: low-vaf
workflow graph vqsr-flow.cwl

run vqsr flow, including vqsr rcal, vqsr apply and plot

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/vqsr-flow.cwl

Branch/Commit ID: master
workflow graph hipepipe.cwl

https://github.com/vuillaut/cookbooks.git

Path: CWL-pipeline/hipepipe.cwl

Branch/Commit ID: master
workflow graph step-valuefrom-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/step-valuefrom-wf.cwl

Branch/Commit ID: main
workflow graph workflow_data.cwl

https://github.com/mr-c/cwltests.git

Path: cwl/workflow_data.cwl

Branch/Commit ID: pack_test
workflow graph download_pheno.cwl

https://github.com/Christensen-Lab-Dartmouth/PyMethylProcess.git

Path: cwl/workflows/download_pheno.cwl

Branch/Commit ID: master
workflow graph VIRTUS.PE.cwl

https://github.com/yyoshiaki/VIRTUS.git

Path: workflow/VIRTUS.PE.cwl

Branch/Commit ID: master
workflow graph fp_filter workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/fp_filter.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph EMG pipeline v3.0 (paired end version)

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3-paired.cwl

Branch/Commit ID: 56dafa4
workflow graph oxog_varbam_annotate_wf.cwl

This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json `

https://github.com/svonworl/OxoG-Dockstore-Tools.git

Path: oxog_varbam_annotate_wf.cwl

Branch/Commit ID: master