Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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chksum_for_corrupted_fastq_files.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_corrupted_fastq_files.cwl Branch/Commit ID: 0.5.0 |
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indexing_bed
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/indexing_bed.cwl Branch/Commit ID: 3bb03c9b |
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ST520102.cwl
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https://github.com/Marco-Salvi/cwl-test.git
Path: wf5201/ST520102.cwl Branch/Commit ID: main |
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pipeline.cwl
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https://github.com/hubmapconsortium/create-vis-symlink-archive.git
Path: pipeline.cwl Branch/Commit ID: 6e55233 |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/DataBiosphere/topmed-workflows.git
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.30.0 |
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md5sum-workflow.cwl
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https://github.com/dockstore-testing/md5sum-checker.git
Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: 1.0.0 |
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bqsr_workflow.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/BQSR/bqsr_workflow.cwl Branch/Commit ID: master |
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alignment_workflow.cwl
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https://github.com/DataBiosphere/topmed-workflows.git
Path: aligner/topmed-cwl/workflow/alignment_workflow.cwl Branch/Commit ID: develop |
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test_samtools.cwl
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https://github.com/nigyta/rice_reseq.git
Path: workflows/test_samtools.cwl Branch/Commit ID: master |
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qiime2 create feature visual summaries
FeatureTable and FeatureData summaries from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2-paired.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-04-features.cwl |
