Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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sc_atac_seq_prep_process_init.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 68e0cc1 |
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rw-flow.cwl
run multiple rw stages sequentially using earlier step output as later stage input_bam |
https://github.com/Sentieon/Sentieon-cwl.git
Path: stage/rw-flow.cwl Branch/Commit ID: master |
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test-workflow.cwl
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https://github.com/pjotrp/CWL-workflows.git
Path: Workflows/test-workflow.cwl Branch/Commit ID: master |
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sac-preprocess.cwl#align-texts-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/sac-preprocess.cwl Branch/Commit ID: master Packed ID: align-texts-wf.cwl |
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SNV background error suppression using panel of normals
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/suppress_background_error.cwl Branch/Commit ID: master |
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Variant calling workflow for given interval
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https://github.com/arvados/arvados-tutorial.git
Path: WGS-processing/cwl/helper/gatk-wf-with-interval.cwl Branch/Commit ID: main |
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snaptools_create_snap_file.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/snaptools_create_snap_file.cwl Branch/Commit ID: 4b2af54 |
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count-lines7-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines7-wf.cwl Branch/Commit ID: main |
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Example of setting up a simulation system
Common Workflow Language example that illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Lysozyme protein (PDB code 1AKI). |
https://github.com/bioexcel/biobb_wf_cwl_tutorial.git
Path: biobb_wf_cwl_tutorial/examples/BioExcel-CWL-MDSetup.cwl Branch/Commit ID: master |
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presto.cwl
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https://github.com/EOSC-LOFAR/presto-cwl.git
Path: presto.cwl Branch/Commit ID: visualise |
