Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: b7d9ace34664d3cedb16f2512c8a6dc6debfc8ca
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: efb40a812cdba2df6699f130ee5aeea9b63045cd Packed ID: main
	gathered exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc
	heatmap.cwl Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension	https://github.com/Barski-lab/workflows.git Path: workflows/heatmap.cwl Branch/Commit ID: dcf683418d101917852b1711a91af817d4ea5d03
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 258bd4353ad1ca7790b3ae626bf42ab8194e7561
	inp_update_wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/inp_update_wf.cwl Branch/Commit ID: 664835e83eb5e57eee18a04ce7b05fb9d70d77b7
	sum-wf.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/sum-wf.cwl Branch/Commit ID: e62f99dd79d6cb9c157cceb458f74200da84f6e9