Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_umi_duplex.cwl

Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
workflow graph ST520102.cwl

https://github.com/Marco-Salvi/dtc51.git

Path: ST520102.cwl

Branch/Commit ID: 272db37d2b8108a146769f0fb0383bb824c9788f
workflow graph ST520109.cwl

https://github.com/Marco-Salvi/dtc51.git

Path: ST520109.cwl

Branch/Commit ID: 272db37d2b8108a146769f0fb0383bb824c9788f
workflow graph ST520105.cwl

https://github.com/Marco-Salvi/dtc51.git

Path: ST520105.cwl

Branch/Commit ID: 272db37d2b8108a146769f0fb0383bb824c9788f
workflow graph ST520111.cwl

https://github.com/Marco-Salvi/dtc51.git

Path: ST520111.cwl

Branch/Commit ID: 272db37d2b8108a146769f0fb0383bb824c9788f
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 31602b94b34ff55876147c7299e1bec47e8d1a31
workflow graph group-isoforms-batch.cwl

Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.

https://github.com/NDeeSeee/workflows-datirium.git

Path: tools/group-isoforms-batch.cwl

Branch/Commit ID: db880986ee60b3594b7d9a9f278199bb4a9227d5
workflow graph bgzip and index VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bgzip_and_index.cwl

Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 2f65fc96207a71b1cda4e246f808bed056608cd0