Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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decentralizedFL.cwl
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https://github.com/CWL-FLOps/DecentralizedFL-CWL.git
Path: CWL_Workflow/decentralizedFL.cwl Branch/Commit ID: main |
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cmsearch-multimodel.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 43d2fb8 |
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exome alignment and germline variant detection
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https://github.com/genome/cancer-genomics-workflow.git
Path: germline_exome_workflow.cwl Branch/Commit ID: toil_compatibility |
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bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR_female_chrX_wXTR.multisapmles.cwl Branch/Commit ID: master |
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icdar2017st-extract-data-all.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/icdar2017st-extract-data-all.cwl Branch/Commit ID: master Packed ID: main |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: preprocess_vcf.cwl Branch/Commit ID: master |
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filter-pcr-artifacts.cwl
DNase-seq - map - Filter PCR Artifacts |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/map/filter-pcr-artifacts.cwl Branch/Commit ID: master |
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Metagenomics workflow
Workflow pilon assembly polishing Steps: - BBmap (Read mapping to assembly) - Pilon |
https://git.wur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_pilon_mapping.cwl Branch/Commit ID: master |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 135976d |
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trimmed_fastq
Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed) |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: 1.1.3 |
