Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs_gvcf.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 789267ce0e3fed674ea5212a562315218fcf1bfc
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 92118627c800e4addb7e29b9dabcca073a5bae71
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: a3d565bf8e630101d25d31804cfbceb0a0ba28de
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	Downsample and HaplotypeCaller	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315
	wf-loadContents.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/wf-loadContents.cwl Branch/Commit ID: 50251ef931d108c09bed2d330d3d4fe9c562b1c3