Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: dc2c019c1aa24cc01b451a0f048cf94a35f163c4
	main-pisces-ras.cwl	https://github.com/bcbio/bcbio_validation_workflows.git Path: somatic-lowfreq/pisces-ras-workflow/main-pisces-ras.cwl Branch/Commit ID: 6e9274ca22e75e3359b5ff74c6657f300138bb95
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: cd1ba3df3745fba4b635f05c67ebeaf3b8a9f4ec Packed ID: main
	umi duplex alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
	PGAP Pipeline, simple user input, PGAPX-134 PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)	https://github.com/ncbi/pgap.git Path: pgap.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: 55b6ee46b0c9fb1c9949cd0888b388c6f11b73b1
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 4a04ad33e311c5e647cef848b74034477cb3c47e
	mut.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut.cwl Branch/Commit ID: a94d75178c24ce77b59403fb8276af9ad1998929
	cache_test_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 9cda157cb4380e9d30dec29f0452c56d0c10d064
	status_postgres.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/dnaseq/status_postgres.cwl Branch/Commit ID: b110a23e2efaaadfd4feca4f9e130946d1c5418d