Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bisulfite QC tools
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 3f85843 |
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chksum_for_corrupted_fastq_files.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_corrupted_fastq_files.cwl Branch/Commit ID: develop |
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Subworkflow for Annotation
\"Main workflow for Metagenome and Metatranscriptome Annotation related CWL file: ./Tools/00_fastp.cwl ./Tools/05_bwa_mem_index.cwl ./Tools/13_subread.cwl ./Workflow/annotation_sw.cwl ./Workflow/megahit_prodigal_sw.cwl ./Workflow/metagenomic_contig_mapping_sw.cwl\" |
https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git
Path: Workflow/main_w.cwl Branch/Commit ID: main |
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wf_get_peaks_trim_partial_se.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_trim_partial_se.cwl Branch/Commit ID: master |
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EMG pipeline v4.0 (single end version)
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-pipeline-v4-single.cwl Branch/Commit ID: master |
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02-trim-pe.cwl
ATAC-seq 02 trimming - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: master |
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intersect_intervals.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/intersect_intervals.cwl Branch/Commit ID: master |
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exomeseq-gatk4-01-preprocessing.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl Branch/Commit ID: master |
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record-output-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/record-output-wf.cwl Branch/Commit ID: master |
