Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf.cwl#VDJ_Assemble_and_Annotate_Contigs_TCR.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: c8d75785fd6accf3b47d1f9ee056675611e22e61

Packed ID: VDJ_Assemble_and_Annotate_Contigs_TCR.cwl
workflow graph wf.cwl#VDJ_Analyze_Reads_TCR.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: c8d75785fd6accf3b47d1f9ee056675611e22e61

Packed ID: VDJ_Analyze_Reads_TCR.cwl
workflow graph wf.cwl#SplitAndSubsample.cwl

SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: c8d75785fd6accf3b47d1f9ee056675611e22e61

Packed ID: SplitAndSubsample.cwl
workflow graph wf.cwl#UncompressDatatables.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: c8d75785fd6accf3b47d1f9ee056675611e22e61

Packed ID: UncompressDatatables.cwl
workflow graph helloworld-nested.cwl

https://github.com/audrium/reana-demo-scattered-helloworld.git

Path: workflow/cwl/helloworld-nested.cwl

Branch/Commit ID: bf9ff46e2b768588b4bf2afd95a0c7c76cf01252
workflow graph BD Rhapsody™ WTA Analysis Pipeline

The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.

 https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: c8d75785fd6accf3b47d1f9ee056675611e22e61

Packed ID: main
workflow graph Abdominal-aortic-aneurysm.cwl

https://github.com/phenoflow/temp.git

Path: Abdominal-aortic-aneurysm.cwl

Branch/Commit ID: read-potential-cases-fhir
workflow graph kf_alignment_optimized_wf

https://github.com/inab/vre_cwl_executor.git

Path: tests/basic/data/workflows/basic_example_3.cwl

Branch/Commit ID: 37323b1cf25e829b2c479b755acecb1ee9028767
workflow graph Imported-codelist.cwl

https://github.com/phenoflow/Imported-codelist---7c131930-2d0b-11ed-8796-bf0bd96b6ffa.git

Path: Imported-codelist.cwl

Branch/Commit ID: read-potential-cases-fhir
workflow graph Long-covid.cwl

https://github.com/phenoflow/Long-covid---9c236c30-7a21-11ed-b9d2-e51f21933d80.git

Path: Long-covid.cwl

Branch/Commit ID: main