Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Gz_Fasta_GC_TRF_CpG.cwl

https://github.com/tonyyzy/tony-gsoc-2018.git

Path: workflow/Gz_Fasta_GC_TRF_CpG.cwl

Branch/Commit ID: master
workflow graph bulk scRNA-seq pipeline using Salmon

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: bulk-pipeline.cwl

Branch/Commit ID: 8af5a1c
workflow graph Whole_Exome-Seq.cwl

https://github.com/athenarc/whole-exome-seq.git

Path: workflows/Whole_Exome-Seq.cwl

Branch/Commit ID: main
workflow graph umi per-lane alignment subworkflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/umi_alignment.cwl

Branch/Commit ID: downsample_and_recall
workflow graph blast_and_filter_workflow.cwl

https://github.com/sapojnik/av_screen_x.git

Path: progs/blast_and_filter_workflow.cwl

Branch/Commit ID: main
workflow graph wf-alignment.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA24385-sv/NA24385-sv-workflow/wf-alignment.cwl

Branch/Commit ID: master
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow with Xenosplit

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq_star_fusion_with_xenosplit.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-assembly-metaSPAdes.cwl

Branch/Commit ID: master
workflow graph ST520117.cwl

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520117.cwl

Branch/Commit ID: main
workflow graph bwa_index

Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bwa_index.cwl

Branch/Commit ID: 1.0.6