Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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rnaseq-pe.cwl
Runs RNA-Seq BioWardrobe basic analysis with pair-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-pe.cwl Branch/Commit ID: 801f7b363e0599b9a28ecda696dfdb1c0e40ce71 |
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FASTQ to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: 86f2f3fb64e916607637d93cf6715bab90b1f1d3 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: ae79bc51e8b502164dbe74ea3b068d6d4d36a1f8 |
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running cellranger mkfastq and count
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 66b5bc323dcd23e1b2c14bf4783babf0f15ca43b |
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WF5201.cwl
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https://github.com/Marco-Salvi/dtc51.git
Path: WF5201.cwl Branch/Commit ID: 908abe780c8b766aea1e1e946d6063a41f494c3a |
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sum-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/sum-wf-noET.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2 |
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kmer_cache_store
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: cd97086739ae5988bab09b05e9259675c4b6bce6 |
