Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-gatk4-03-organizedirectories.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl

Branch/Commit ID: v2.0.3
workflow graph cnv_manta

CNV Manta calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/cnv_manta.cwl

Branch/Commit ID: 3bb03c9b
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: master
workflow graph ST520108.cwl

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520108.cwl

Branch/Commit ID: main
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1.0.0
workflow graph alignment_workflow.cwl

https://github.com/uc-cdis/topmed-cwl.git

Path: aligner/functional-equivalence/workflow/alignment_workflow.cwl

Branch/Commit ID: master
workflow graph wflow_all_mc.cwl

https://github.com/lukasheinrich/cwltests.git

Path: cwl/wflow_all_mc.cwl

Branch/Commit ID: master
workflow graph Apply filters to VCF file

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/filter_vcf_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph main-NA24385-sv.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: NA24385-sv/NA24385-sv-workflow/main-NA24385-sv.cwl

Branch/Commit ID: master
workflow graph bwa-mem-sort-distr.cwl

https://github.com/sentieon/sentieon-cwl.git

Path: stage/bwa-mem-sort-distr.cwl

Branch/Commit ID: master