Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Create Genomic Collection for Bacterial Pipeline

https://github.com/slottad/pgap.git

Path: genomic_source/wf_genomic_source.cwl

Branch/Commit ID: master
workflow graph main-wes_chr21_test.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-arvados/main-wes_chr21_test.cwl

Branch/Commit ID: master
workflow graph workflow.cwl

https://github.com/uniqueg/RD_pipeline.git

Path: workflow.cwl

Branch/Commit ID: master
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 56dafa4
workflow graph pipeline-pe-stranded-with-sjdb.cwl

RNA-seq pipeline - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/pipeline-pe-stranded-with-sjdb.cwl

Branch/Commit ID: master
workflow graph harmonization_bwa_mem_prod.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem_prod.cwl

Branch/Commit ID: feat/retry
workflow graph mutations.cwl

https://github.com/bioexcel/biobb_wf_mutations.git

Path: biobb_wf_mutations/cwl/mutations.cwl

Branch/Commit ID: master
workflow graph cnv.cwl

Copynumber variation workflow, runs ADTEx and Varscan

 https://github.com/BD2KGenomics/dockstore_workflow_cnv.git

Path: cnv.cwl

Branch/Commit ID: v1.0.0
workflow graph add_multiply_example.cwl

https://github.com/NLeSC/scriptcwl.git

Path: scriptcwl/examples/add_multiply_example.cwl

Branch/Commit ID: master
workflow graph A CGP workflow to move and validate an interleaved fastq

A workflow to copy the input interleaved fastq file to a new place and validate the file format and base quality score range. See the [workflow-seq-import](https://github.com/cancerit/workflow-seq-import) website for more information.

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/move_and_validate_interleaved_fq.cwl

Branch/Commit ID: 0.2.2