Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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qiime2 identify differentially abundant features
Differential abundance testing with ANCOM from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-09-ancom.cwl |
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count-lines11-null-step-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines11-null-step-wf-noET.cwl Branch/Commit ID: main |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 135976d |
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wf-alignment.cwl
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https://github.com/garyluu/bcbio_validation_workflows.git
Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-alignment.cwl Branch/Commit ID: master |
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mast.cwl
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https://github.com/alahiff/fastwf.git
Path: mast.cwl Branch/Commit ID: master |
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WGS QC workflow
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: downsample_and_recall |
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qiime2 create phylogenetic tree
Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-05-phylogeny.cwl |
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scatter-valuefrom-wf3.cwl#main
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/scatter-valuefrom-wf3.cwl Branch/Commit ID: master Packed ID: main |
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5S-from-tablehits.cwl
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: master |
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final_filtering
Final filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/subworkflows/final_filtering.cwl Branch/Commit ID: 3bb03c9b |
