Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph packed.cwl#main

https://github.com/mr-c/cwltests.git

Path: cwl/packed.cwl

Branch/Commit ID: pack_test

Packed ID: main
workflow graph pack.cwl

create textures and pack them to be a stellaris mod

 https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: pack/pack.cwl

Branch/Commit ID: master
workflow graph trimmed_fastq

Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl

Branch/Commit ID: 1.1.3
workflow graph rRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 6c856cd
workflow graph wf_clipseqcore_pe_2barcodes.cwl

Workflow for handling reads containing two barcodes. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs

https://github.com/YeoLab/eclip.git

Path: cwl/wf_clipseqcore_pe_2barcodes.cwl

Branch/Commit ID: master
workflow graph black-diamond-workflow.cwl

https://github.com/pegasus-isi/cwl-to-dax-reference.git

Path: black-diamond-workflow/cwl/black-diamond-workflow.cwl

Branch/Commit ID: master
workflow graph module-5

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-5.cwl

Branch/Commit ID: 2.4.x
workflow graph exome alignment with qc

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/alignment_exome.cwl

Branch/Commit ID: downsample_and_recall
workflow graph kb-tss-preprocess-all.cwl#main

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/kb-tss-preprocess-all.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: ca6ca613