Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph STAR-RNA-Seq alignment and transcript/gene abundance workflow with Xenosplit

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/rnaseq_star_fusion_with_xenosplit.cwl

Branch/Commit ID: master
workflow graph bqsr_workflow.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/BQSR/bqsr_workflow.cwl

Branch/Commit ID: 0.0.33_dmp
workflow graph bam_filtering

BAM filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl

Branch/Commit ID: master
workflow graph ST520101.cwl

https://github.com/Marco-Salvi/dtc51.git

Path: ST520101.cwl

Branch/Commit ID: main
workflow graph main-prealign.cwl

https://github.com/bcbio/test_bcbio_cwl.git

Path: prealign/prealign-workflow/main-prealign.cwl

Branch/Commit ID: master
workflow graph Transcripts annotation workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: assembly
workflow graph Transcripts annotation workflow

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: master
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 9c57dba
workflow graph Detect Variants workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/detect_variants.cwl

Branch/Commit ID: low-vaf
workflow graph Runs InterProScan on batches of sequences to retrieve functional annotations.

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: master