Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ConcordanceCheckerWorkflow.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: vcf-comparator/ConcordanceCheckerWorkflow.cwl

Branch/Commit ID: 1.16.0
workflow graph preprocess.cwl

https://github.com/epigenomics-screw/screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: scatter
workflow graph simple_two_step.cwl

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_two_step.cwl

Branch/Commit ID: master
workflow graph rest_parallel.cwl

https://github.com/yuandou168/DecentralizedFL-CWL.git

Path: CWL_Workflow/rest_parallel.cwl

Branch/Commit ID: main
workflow graph pipeline-pe.cwl

STARR-seq pipeline - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/pipeline-pe.cwl

Branch/Commit ID: master
workflow graph stage_workflow.cwl

https://github.com/nci-gdc/gatk4_mutect2_cwl.git

Path: utils-cwl/subworkflow/stage_workflow.cwl

Branch/Commit ID: master
workflow graph 02-trim-pe.cwl

RNA-seq 02 trimming - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/RNA-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: master
workflow graph format-maf

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl

Branch/Commit ID: dev
workflow graph qc_workflow_wo_waltz.cwl

This workflow is intended to be used to test the QC module, without having to run the long waltz step

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/QC/qc_workflow_wo_waltz.cwl

Branch/Commit ID: master
workflow graph Per-region pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: master