Explore Workflows

Receive simulation model parameter update or data to derive simulation model parameter(s) (e.g., by querying a database or triggered by an interface input). Assert ingest using a pre-defined schema describing the required input data. DEVELOPERNOTE - missing step of metadata enrichment?

https://github.com/gammasim/workflows.git

Path: workflows/ReceiveAndAssert.cwl

Branch/Commit ID: first-example

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_chimeric_se.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/ABRA/abra_workflow.cwl

Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31

Plot and compare array element coordinates.

https://gitlab.desy.de/gernot.maier/cwlsandbox.git

Path: workflows/ValidateArrayElementCoordinates.cwl

Branch/Commit ID: 93ff5764b93a75088fa507912fa52f5feedb9690

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl

Branch/Commit ID: d7b1bf353dcc43c707c49a018f2870584821d389

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/waltz/waltz_workflow_all_bams.cwl

Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf

This workflow performs calibrations, related to the molecular content of the atmosphere. To be updated...

https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git

Path: workflows/calibpipe/AtmosphericCalibrations/MolecularAtmosphere/uc-dpps-cp-110.cwl

Branch/Commit ID: 3ee0537d37f8e32666d2ec72e54f42a40f72bce8

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 135976dc51f067b76db0a923a832d892ed64264c