Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	kmer_top_n_extract	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 3f3b186da9bf82a5e2ae74ba27aef35a46174ebe
	default-dir5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-dir5.cwl Branch/Commit ID: 9cda157cb4380e9d30dec29f0452c56d0c10d064
	trim-rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe.cwl Branch/Commit ID: 568da91bb1c6182ba4f146e2a729cac1c3d8783c
	plant2human workflow Novel gene discovery workflow by comparing plant species and model organisms with humans based on structural similarity search.	https://github.com/yonesora56/plant2human.git Path: Workflow/plant2human_v1_1.cwl Branch/Commit ID: 9bd80581d7ced3ee307b020eb4b091e411c3cbfb
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: ae79bc51e8b502164dbe74ea3b068d6d4d36a1f8
	bam_readcount workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985
	scatter-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: 280a852e74aec08cf79687e8004e17b1ab464534
	heatmap.cwl Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension	https://github.com/Barski-lab/workflows.git Path: workflows/heatmap.cwl Branch/Commit ID: 568da91bb1c6182ba4f146e2a729cac1c3d8783c
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 7bfe73a708dbf31d037303bb5a8fed1a79984b0f