Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph phase VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/phase_vcf.cwl

Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d

workflow graph tt_kmer_compare_wnode

Pairwise comparison

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_compare_wnode.cwl

Branch/Commit ID: 1b8d71c75156a1a62bf0477d59db26010e2dcc29

workflow graph no-inputs-wf.cwl

Workflow without inputs.

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/no-inputs-wf.cwl

Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2

workflow graph PCA - Principal Component Analysis

Principal Component Analysis --------------- Principal component analysis (PCA) is a statistical procedure that uses an orthogonal transformation to convert a set of observations of possibly correlated variables (entities each of which takes on various numerical values) into a set of values of linearly uncorrelated variables called principal components. The calculation is done by a singular value decomposition of the (centered and possibly scaled) data matrix, not by using eigen on the covariance matrix. This is generally the preferred method for numerical accuracy.

https://github.com/datirium/workflows.git

Path: workflows/pca.cwl

Branch/Commit ID: 12e5256de1b680c551c87fd5db6f3bc65428af67

workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83

workflow graph count-lines1-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl

Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883

workflow graph Detect Docm variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_cle.cwl

Branch/Commit ID: 641083e9ed933d388f36fa04c00c20a810599e94

workflow graph Tumor-Only Detect Variants workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_detect_variants.cwl

Branch/Commit ID: f615832615c3b41728df8e47b72ef11e37e6a9e5

workflow graph schemadef-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/schemadef-wf.cwl

Branch/Commit ID: 707ebcd2173889604459c5f4ffb55173c508abb3

workflow graph Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pvacseq.cwl

Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d