Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph snapanalysis_setup_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snapanalysis_setup_and_analyze.cwl

Branch/Commit ID: 102d8cb
workflow graph main.cwl

https://github.com/alpha-unito/streamflow-fl.git

Path: cwl/main.cwl

Branch/Commit ID: master
workflow graph wf_trim_partial_and_map_se_scatter.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_trim_partial_and_map_se_scatter.cwl

Branch/Commit ID: master
workflow graph pipeline-bam2vcf.cwl

DNAseq pipeline from bam to vcf

 https://github.com/Sentieon/Sentieon-cwl.git

Path: pipeline/pipeline-bam2vcf.cwl

Branch/Commit ID: master
workflow graph nmrpipe_workflow.cwl

https://github.com/andreagia/CWL_dem1_NMR_Peak_Picking.git

Path: nmrpipe_workflow.cwl

Branch/Commit ID: master
workflow graph 02-trim-pe.cwl

STARR-seq 02 trimming - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: master
workflow graph Dockstore.cwl

This is a description

 https://github.com/KTest-Organization/github-apps-workflow.git

Path: Dockstore.cwl

Branch/Commit ID: master
workflow graph kallisto_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/kallisto/paired_end/kallisto_wf_pe.cwl

Branch/Commit ID: master
workflow graph bwa_index

Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bwa_index.cwl

Branch/Commit ID: 1.0.5
workflow graph umi duplex alignment fastq workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: No_filters_detect_variants