Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf-variantcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-arvados/wf-variantcall.cwl

Branch/Commit ID: master

workflow graph kfdrc_flagstat_qc.cwl

https://github.com/kids-first/kf-rnaseq-workflow.git

Path: workflow/kfdrc_flagstat_qc.cwl

Branch/Commit ID: master

workflow graph RNA-Seq alignment and transcript/gene abundance workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: rnaseq/workflow.cwl

Branch/Commit ID: toil_compatibility

workflow graph transcoding-workflow.cwl

https://github.com/RoRu/Video-Packager.git

Path: cwl-scripts/transcoder/transcoding-workflow.cwl

Branch/Commit ID: master

workflow graph ensembl_genomes_to_variation_graph_with_uniprot_annotation_rdf.cwl

https://github.com/vgteam/Veguns.git

Path: ensemblBacteriaUniProtVgExample/ensembl_genomes_to_variation_graph_with_uniprot_annotation_rdf.cwl

Branch/Commit ID: master

workflow graph 5S-from-tablehits.cwl

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/5S-from-tablehits.cwl

Branch/Commit ID: 5dc7c5c

workflow graph pindel parallel workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: master

workflow graph checker_workflow_wrapping_workflow.cwl

This demonstrates how to wrap a \"real\" workflow with a checker workflow that runs both the tool and a tool that performs verification of results

https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git

Path: checker_workflow_wrapping_workflow.cwl

Branch/Commit ID: develop

workflow graph wf_get_peaks_se.cwl

https://github.com/yeolab/eclip.git

Path: cwl/wf_get_peaks_se.cwl

Branch/Commit ID: master

workflow graph samtools_sort

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_sort.cwl

Branch/Commit ID: master