Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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03-map-pe.cwl
STARR-seq 03 mapping - reads: PE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl Branch/Commit ID: master |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 0d9e6bb52eac0c209af3977aa779e39aaa432458 |
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merge_duprem_filter.cwl
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https://github.com/CompEpigen/ChIPseq_workflows.git
Path: CWL/workflow_modules/merge_duprem_filter.cwl Branch/Commit ID: master |
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ocrevaluation-performance-wf-pack.cwl#main
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/ocrevaluation-performance-wf-pack.cwl Branch/Commit ID: master Packed ID: main |
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Super-enhancer post ChIP-Seq analysis
Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff) |
https://github.com/datirium/workflows.git
Path: workflows/super-enhancer.cwl Branch/Commit ID: 9b4dc225c537685b9c9a32d931d3892d20953dd7 |
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host.sort.workflow.cwl
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https://github.com/azzaea/tsts.git
Path: cwl/host.sort.workflow.cwl Branch/Commit ID: master |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: No_filters_detect_variants |
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batch-preprocess-ont.cwl
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https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: PreProcessing/batch-preprocess-ont.cwl Branch/Commit ID: master |
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count-lines17-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines17-wf.cwl Branch/Commit ID: master |
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main-NA12878-platinum-chr20.cwl
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https://github.com/bcbio/bcbio_validation_workflows.git
Path: NA12878-chr20/NA12878-platinum-chr20-workflow-arvados/main-NA12878-platinum-chr20.cwl Branch/Commit ID: master |
