Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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canine_mutation_burden_module.cwl
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https://github.com/d3b-center/canine-dev.git
Path: subworkflows/canine_mutation_burden_module.cwl Branch/Commit ID: master |
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04-quantification.cwl
STARR-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/STARR-seq_pipeline/04-quantification.cwl Branch/Commit ID: master |
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split-bams-by-strand-and-index.cwl
Split reads in a BAM file by strands and index forward and reverse output BAM files |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/quant/split-bams-by-strand-and-index.cwl Branch/Commit ID: master |
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5S-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/5S-from-tablehits.cwl Branch/Commit ID: c211071 |
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bulk-atac-seq-pipeline.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: bulk-atac-seq-pipeline.cwl Branch/Commit ID: 3da5dd0 |
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list ZIP content by URL
curl will download a HTTP/HTTPS resource or file from a given URL, following any redirections. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zip-content-by-url.cwl Branch/Commit ID: master |
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igv-report_maf_workflow.cwl
Workflow to run GetBaseCountsMultiSample fillout on a number of samples, each with their own bam and maf files |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/igv-report_maf_workflow.cwl Branch/Commit ID: master |
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HS Metrics workflow
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: low-vaf |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: master |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 5465f66 |
