Explore Workflows

Annotate variants provided in a gziped VCF using SnpEff

https://github.com/andrewjesaitis/cwl-tutorial.git

Path: snpeff-workflow.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: 14985c9

https://github.com/reanahub/reana-demo-root6-roofit.git

Path: workflow/cwl/workflow.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_rRNA_headers.cwl

Branch/Commit ID: e1b0fce

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/ocrevaluation-performance-wf.cwl

Branch/Commit ID: master

https://github.com/mr-c/gales.git

Path: cwl/workflows/prok-annotation-cheetah.cwl

Branch/Commit ID: upgrade-test

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/genomel_cohort_genotyping.cwl

Branch/Commit ID: master

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/YW2CWL_parser/wf_YW2CWL_parser.cwl

Branch/Commit ID: master

EPOS-IT Curl Workflow: downloads data based on curl input.

https://github.com/andrejsim/epos-cwl-workflows.git

Path: epos_accept_single_url_curl.cwl

Branch/Commit ID: master

https://github.com/sfu-ireceptor/AIRR-seqAA.git

Path: cwl/id_to_json_workflow2.cwl

Branch/Commit ID: master