Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: c211071
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 71d9c83
workflow graph wf_get_reproducible_eclip_peaks.cwl

The main workflow that produces two reproducible peaks via IDR given two eCLIP samples (1 input, 1 IP each).

https://github.com/YeoLab/merge_peaks.git

Path: cwl/wf_get_reproducible_eclip_peaks.cwl

Branch/Commit ID: master
workflow graph 05-quantification.cwl

ATAC-seq - Quantification

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/05-quantification.cwl

Branch/Commit ID: master
workflow graph bam_readcount workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: master
workflow graph wf.cwl#VDJ_Assemble_and_Annotate_Contigs_TCR.cwl

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_Assemble_and_Annotate_Contigs_TCR.cwl
workflow graph vqsr-flow.cwl

run vqsr flow, including vqsr rcal, vqsr apply and plot

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/vqsr-flow.cwl

Branch/Commit ID: master
workflow graph SetParameterFromExternal

Receive parameter update (e.g., by querying an external source like a configuration or calibration database) or by expert input (e.g., by a member of a telescope team or a simulation pipeline expert).

 https://github.com/gammasim/workflows.git

Path: workflows/SetParameterFromExternal.cwl

Branch/Commit ID: main
workflow graph umi per-lane alignment subworkflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/umi_alignment.cwl

Branch/Commit ID: low-vaf
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 930a2cf