Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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test_samtools.cwl
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https://github.com/nigyta/rice_reseq.git
Path: workflows/test_samtools.cwl Branch/Commit ID: master |
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04-quantification-se-revstranded.cwl
RNA-seq 04 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-se-revstranded.cwl Branch/Commit ID: master |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223 |
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workflow.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_apollo2_data_processing/processing/workflow.cwl Branch/Commit ID: master |
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md5sum.cwl
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https://github.com/briandoconnor/dockstore-workflow-md5sum.git
Path: md5sum.cwl Branch/Commit ID: 1.3.0 |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fastq.workflow.cwl Branch/Commit ID: master |
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animal-genome-assembly.packed.cwl#hybrid_error_correction.cwl
Sub workflow used in the Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak), CWLized by Tazro Ohta (@inutano) |
https://github.com/pitagora-network/DAT2-cwl.git
Path: workflow/animal-genome-assembly/animal-genome-assembly.packed.cwl Branch/Commit ID: main Packed ID: hybrid_error_correction.cwl |
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dropEst pipeline
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https://github.com/hubmapconsortium/ucsd-snareseq-pipeline.git
Path: dropest.cwl Branch/Commit ID: master |
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chksum_seqval_wf_paired_fq.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: 0.2.0 |
