Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	gather AML trio outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle_gathered.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 76a35e7d885790f30559beb31f3b58770e343afd
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: 14d004a163e02a5f8f8590e568a2f4f153508931
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: e668f9c4047f1971ae53040a5af3eccc4bfc3c53
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: add6b7724698694e0e72d972e2e85e1ae4e67902
	env-wf2.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/env-wf2.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98
	group-isoforms-batch.cwl Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.	https://github.com/datirium/workflows.git Path: tools/group-isoforms-batch.cwl Branch/Commit ID: 93b844a80f4008cc973ea9b5efedaff32a343895
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 1b8d71c75156a1a62bf0477d59db26010e2dcc29
	STAR-RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/pipelines/rnaseq_star_fusion.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d