Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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index sim seq
create sorted / filtered similarity file with feature sequences, and index by md5 |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/index_sim_seq.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6 |
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abundance
abundace profiles from annotated files, for protein and/or rna |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6 |
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Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5 |
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star-cufflinks_wf_pe.cwl
|
https://github.com/pitagora-network/pitagora-cwl.git
Path: workflows/star-cufflinks/paired_end/star-cufflinks_wf_pe.cwl Branch/Commit ID: 85c5420fad00cc6ecefb08d3be999e82d4a69bae |
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integrity.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de |
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umi molecular alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd |
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trnascan_wnode and gpx_qdump combined
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: d2884980a33ba4097cb3514cab5b425e2112fe10 |
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gp_makeblastdb
|
https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 83ef15482f405bc3d24f88cbf405ceffea9b3023 |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64 |
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blastp_wnode_naming
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64 |