Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	star-stringtie_wf_pe.cwl	https://github.com/pitagora-network/pitagora-cwl.git Path: workflows/star-stringtie/paired_end/star-stringtie_wf_pe.cwl Branch/Commit ID: e2528f4d7e4ba5664fc171f9a25fc1490ae27c91
	alignment_workflow.cwl	https://github.com/DataBiosphere/topmed-workflows.git Path: aligner/topmed-cwl/workflow/alignment_workflow.cwl Branch/Commit ID: a704a63eccf434f62bf7f5be974cc210c0ffba86
	fastq_clean_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/fastq_clean_pe.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	fastq_clean_se.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/fastq_clean_se.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
	Per-chromosome pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	bwa_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/bwa_pe.cwl Branch/Commit ID: a3eec6c1081d28efe00a0d269fb41303acc4ccdd
	fp_filter workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
	qc-basic.workflow.cwl	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/qc-basic.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6
	Preprocess fastq Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: 210a46717d091c186235d211c1175f02d0a644b6