Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	call_cnv.cwl	https://github.com/mskcc/Innovation-Pipeline.git Path: workflows/subworkflows/call_cnv.cwl Branch/Commit ID: b0f226a9ac5152f3afe0d38c8cd54aa25b8b01cf
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: ae79bc51e8b502164dbe74ea3b068d6d4d36a1f8
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	Run genomic CMsearch	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	fillout_pre_processing.cwl	https://github.com/mskcc/pluto-cwl.git Path: cwl/fillout_pre_processing.cwl Branch/Commit ID: 59b69eed7ffefcffd81313ec8ffb84c0d716b933
	prefetch_fastq.cwl Worfklow combining an SRA fetch from NCBI with a fastq-dump cmd	https://github.com/svonworl/bio-cwl-tools.git Path: sratoolkit/prefetch_fastq.cwl Branch/Commit ID: 9d4e46105a269408469d9047be271da5be8de87a
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 96dbb414d287f4382e2d477fb1851aeaa5f14f2b
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568