Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
---|---|---|---|
transform.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/validate/transform.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
||
hi-c-processing-pairs-nonorm.cwl
|
https://github.com/4dn-dcic/pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-pairs-nonorm.cwl Branch/Commit ID: 46dbd4c38119ef8a2d00b44678e45dafd430f5fa |
||
Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 49732e54e2fe2eafd2f82df3c482c73e642f6d64 |
||
etl.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
||
integrity.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/integrity.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
||
count-lines1-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa |
||
exome alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 76a35e7d885790f30559beb31f3b58770e343afd |
||
readgroup_fastq_se.cwl
|
https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/readgroup_fastq_se.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
||
Unaligned to aligned BAM
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a |
||
PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199 |