Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph xenbase-rnaseq-se.cwl

XenBase workflow for analysing RNA-Seq single-end data

https://github.com/datirium/workflows.git

Path: workflows/xenbase-rnaseq-se.cwl

Branch/Commit ID: 9a2c389364674221fab3f0f6afdda799e6aa3247
workflow graph dynresreq-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl

Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda
workflow graph extract_readgroups_bam.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroups_bam.cwl

Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2
workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: e509210450e4c62aecb99a228fc97f0eae2d9580
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl

Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda
workflow graph if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 4765cf6955bdce1320fdead7fe51be0e1b63c33d
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: 50d161364e2859ed5c95ef07c9f7234f1431cf31
workflow graph salmon_wf_pe.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/paired_end/salmon_wf_pe.cwl

Branch/Commit ID: 85c5420fad00cc6ecefb08d3be999e82d4a69bae
workflow graph salmon_wf_se.cwl

https://github.com/pitagora-network/pitagora-cwl.git

Path: workflows/salmon/single_end/salmon_wf_se.cwl

Branch/Commit ID: 85c5420fad00cc6ecefb08d3be999e82d4a69bae
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199