Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph final-workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: final-workflow.cwl

Branch/Commit ID: 556884e8e205295e561b1d9140d836cdd6c1d8c9
workflow graph workflow-blast-phobius.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-blast-phobius.cwl

Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 1560e7817fdb71d58aca7f98aba68809d840ade1
workflow graph fastq_foreign_chromosome_cleanup

This workflow remove foreign chromosome comtamination from blastn TSV files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-foreign-chromosome-cleanup.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
workflow graph spaceTxConversion.cwl

https://github.com/hubmapconsortium/spatial-transcriptomics-pipeline.git

Path: steps/spaceTxConversion.cwl

Branch/Commit ID: 2e31b8ddd4d509c7bbcb983ad41e401687623ddb
workflow graph aws_freebayes.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/aws_freebayes.cwl

Branch/Commit ID: 13c106834d6c9031de08496faeff521740a0c95f
workflow graph xenbase-sra-to-fastq-pe.cwl

https://github.com/Barski-lab/workflows.git

Path: subworkflows/xenbase-sra-to-fastq-pe.cwl

Branch/Commit ID: eb2c3facf657e80cc0fb1bf34b3733ee07b76ee2
workflow graph pipeline_v2.cwl#openoil_pipeline

Animation of an oil spill with openoil

 https://github.com/ILIAD-ocean-twin/application_package.git

Path: openoil/pipeline_v2.cwl

Branch/Commit ID: 7e4399c3dd48a929d202b0e0a24bdbf520640e89

Packed ID: openoil_pipeline
workflow graph vqsr.cwl

https://github.com/biosciencedbc/jga-analysis.git

Path: multi-samples/Workflows/vqsr.cwl

Branch/Commit ID: 651b97b982a48cdb4e5f36edc0b1f38b25b30c10
workflow graph topmed-alignment-checker.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl

Branch/Commit ID: 209e5b1b56abbf900717dc4c2d08e2093e7efdda