Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	find downloadable files in zenodo community For a given Zenodo community, retrieve a list of all its downloadable files	https://github.com/stain/ro-index-paper.git Path: code/data-gathering/workflows/zenodo-community-links.cwl Branch/Commit ID: 4360a062e7cff5aadacbf401e8e743a660657680
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316
	foreign_screening.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/foreign_screening.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7e3e1cb249e85285e27ef3ebd4104965f835241d
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0805e8e0d358136468e0a9f49e06005e41965adc
	env-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: e59538cd9899a88d7e31e0f259bc56734f604383
	env-wf1.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf1.cwl Branch/Commit ID: e835bc0487fe42fb330b6222c9be65d18dd81ec9
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095