Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph workflow.cwl

https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git

Path: Workflows/PSD_workflow_smr_1/workflow.cwl

Branch/Commit ID: 0730e9965cb59b4a29cb5b0b588384839d0a017b
workflow graph idr-no-pooled.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/idr-no-pooled.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
workflow graph kfdrc_alignment_pipeline.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/pilot-run/worklflows/kfdrc_alignment_pipeline.cwl

Branch/Commit ID: 762c0718a7c506360423c3cb5477bd85826ea5de
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph exome alignment with qc, no bqsr, no verify_bam_id

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_exome_nonhuman.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph wf_get_peaks_trim_partial_scatter_se.cwl

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_trim_partial_scatter_se.cwl

Branch/Commit ID: c0fffc4979a92371dc0667a03e3d957bf7f77600
workflow graph rhapsody_targeted_1.9-beta.cwl#SplitAndSubsample.cwl

SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter.

https://github.com/longbow0/cwl.git

Path: v1.9-beta/rhapsody_targeted_1.9-beta.cwl

Branch/Commit ID: b9ec66d82bc04934fbe9f9088ae7e802d72c4a4e

Packed ID: SplitAndSubsample.cwl
workflow graph Run genomic CMsearch (Rfam rRNA)

https://github.com/ncbi/pgap.git

Path: bacterial_ncrna/wf_gcmsearch.cwl

Branch/Commit ID: c7c674b873b9925b28ffbd602974eec4bfe78cf9
workflow graph samtools_view_sam2bam

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/samtools_view_sam2bam.cwl

Branch/Commit ID: f4c51a054b1ec51d07d89c6a8218e610653675f3
workflow graph 811-12.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/811-12.cwl

Branch/Commit ID: 1397d96ad97fe8abfd1184675d728a8a04699d67