Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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extract_readgroups_bam_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam_http.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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HS Metrics workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f |
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lowercase-directory.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/lowercase-directory.cwl Branch/Commit ID: d187a94a601e806e001d31362ba0c9c2534eb426 |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
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revsort-array.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/Duke-GCB/calrissian.git
Path: input-data/revsort-array.cwl Branch/Commit ID: 2ed785497852f144da8236caccfedad556802d98 |
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fastqtosam_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_se.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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single_lane_sample.cwl
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https://github.com/cancerit/cgpRna.git
Path: cwls/single_lane_sample.cwl Branch/Commit ID: 69e15a07471af52832f925ddd33f3088c00640c4 |
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post-correct-test-files.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/post-correct-test-files.cwl Branch/Commit ID: d187a94a601e806e001d31362ba0c9c2534eb426 |
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list ZIP content by URL
curl will download a HTTP/HTTPS resource or file from a given URL, following any redirections. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zip-content-by-url.cwl Branch/Commit ID: a3ce8d810d16111d695a04316ef55671d2d38ee5 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb |