Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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ocrevaluation-performance-test-files-wf-pack.cwl#ocrevaluation-performance-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/ocrevaluation-performance-test-files-wf-pack.cwl Branch/Commit ID: 5cff3f0e426635469d130c95d1222e9c54bdfd90 Packed ID: ocrevaluation-performance-wf.cwl |
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cwlsite.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/site/cwlsite.cwl Branch/Commit ID: f207d168f4e7eb4dd2279840d4062ba75d9c79c3 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533 |
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dynresreq-workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/dynresreq-workflow.cwl Branch/Commit ID: 280a852e74aec08cf79687e8004e17b1ab464534 |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 7e3e1cb249e85285e27ef3ebd4104965f835241d |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 4ea5956bb97ea2eb6de124bc9b6a6a81a14fd2e7 |
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count-lines8-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 03af16c9df2ee77485d4ab092cd64ae096d2e71c |